docs: add paper citations, fix pedagogical issues, improve SKILL.md
- Cite arxiv 2602.23922 (Invariant-Driven Automated Testing) in all major docs - Add Progressive Complexity section to SKILL.md for LLM guidance - Fix SKILL.md Fast Start example to use deterministic ID generation - Fix getting-started.md failure output inconsistency - Fix auth-patterns.md TypeScript syntax in JS doc - Fix fastify-structure.md Date.now() in test helper - Fix observe.md misleading workspace heading - Build: clean | Tests: 849 pass, 0 fail
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APOPHIS is designed to be safe and predictable for LLM-generated Fastify services.
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It applies the invariant-driven approach from [Invariant-Driven Automated Testing](https://arxiv.org/abs/2602.23922) (Malhado Ribeiro, 2021) to LLM-assisted development: constrained vocabulary, deterministic replay, and executable contracts give coding agents a verifiable loop between generated changes and behavioral correctness.
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## Why APOPHIS Is Good for LLM-Generated Services
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Coding agents benefit from:
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